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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101079017Si:ch73-194h10.2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2076 aa)    
Predicted Functional Partners:
LOC101065208
Usher syndrome 1C.
   
 0.763
LOC101066299
Whirlin a.
    
 0.674
LOC105419521
Whirlin-like isoform X1.
    
 0.674
LOC101077154
Usher syndrome 1Gb (autosomal recessive).
   
 0.659
LOC101077248
Usher syndrome 1Ga (autosomal recessive).
   
 0.659
anks4b
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.659
neo1
Neogenin 1b.
    
 0.547
dcc
DCC netrin 1 receptor.
    
 0.547
LOC101078395
Immunoglobulin superfamily, DCC subclass, member 4.
    
  0.519
ENSTRUP00000008077
Calmodulin 1b.
    
 0.517
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.