STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101074851Neuronal pentraxin receptor a. (442 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
    
 0.749
rcn2
Reticulocalbin 2.
    
 
 0.705
nptx1
Uncharacterized protein.
   
 
 0.700
LOC101073773
Polyhomeotic homolog 2b (Drosophila).
    
 0.678
cbx6
Chromobox homolog 6a.
 
    
 0.639
LOC101066578
Nucleosome assembly protein 1-like 4a; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.631
siae
Sialic acid acetylesterase.
    
   0.625
eloa
Elongin A.
      
 0.615
LOC105416376
Elongin A, like.
      
 0.615
qdpr
Quinoid dihydropteridine reductase a.
      
 0.602
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.