STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
gpn3GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (285 aa)    
Predicted Functional Partners:
ENSTRUP00000069471
RNA polymerase II associated protein 2.
    
 
 0.986
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 
 0.974
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
   
 
 0.969
polr2d
Polymerase (RNA) II (DNA directed) polypeptide D.
    
 
 0.966
polr2a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.966
pih1d1
PIH1 domain containing 1.
    
 
 0.964
polr2g
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
 
 0.963
polr3d
Polymerase (RNA) III (DNA directed) polypeptide D.
   
 
 0.959
polr3b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.957
polr3e
Polymerase (RNA) III (DNA directed) polypeptide E.
   
 
 0.956
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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