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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpn3GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (285 aa)    
Predicted Functional Partners:
ENSTRUP00000010170
annotation not available
   
 
0.900
ENSTRUP00000080697
annotation not available
   
 
 0.900
ENSTRUP00000069471
RNA polymerase II associated protein 2.
    
 
 0.875
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 
 0.871
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
   
 
 0.790
polr2l
Polymerase (RNA) II (DNA directed) polypeptide L.
    
 
 0.780
pfdn6
Prefoldin subunit 6.
   
  
 0.750
mrpl2
Mitochondrial ribosomal protein L2.
   
    0.744
polr2d
Polymerase (RNA) II (DNA directed) polypeptide D.
    
 
 0.734
polr3b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.732
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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