Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC101075773Si:dkey-102f14.5. (423 aa)    
Predicted Functional Partners:
pomp
Proteasome maturation protein.
    
   0.719
WHAMM
WASP homolog associated with actin, golgi membranes and microtubules.
      
 0.653
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
   0.642
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
   0.642
LOC101079656
WD repeat domain, phosphoinositide interacting 1.
    
 
 0.635
WIPI1
WD repeat domain, phosphoinositide interacting 1.
    
 
 0.635
wipi2
WD repeat domain, phosphoinositide interacting 2.
    
 
 0.635
psmg2
Proteasome assembly chaperone 2; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1. Belongs to the PSMG2 family.
    
   0.629
zbtb16
Zinc finger and BTB domain containing 16a.
    
   0.627
xylb
Xylulokinase homolog (H. influenzae).
      
 0.624
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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