STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
igfbp6Insulin-like growth factor binding protein 6b. (201 aa)    
Predicted Functional Partners:
igf2
Insulin-like growth factor 2b.
   
 0.734
LOC101071292
Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.
    
   0.626
igfals
Insulin-like growth factor binding protein, acid labile subunit.
    
 0.541
ghr2
Uncharacterized protein.
      
 0.484
igfbp1
IGFBP N-terminal domain-containing protein.
      
 0.460
LOC101074298
Anion exchange protein.
      
 0.452
cenpi
Centromere protein I.
      
 0.450
LOC101062641
Cytochrome P450, family 27, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
      
 0.440
H2VD05_TAKRU
Cytochrome P450, family 2, subfamily AD, polypeptide 2; Belongs to the cytochrome P450 family.
      
 0.435
pappa
Pregnancy-associated plasma protein A, pappalysin 1a.
    
 0.407
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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