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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101077748Cytochrome b5 domain containing 1; Belongs to the cytochrome b5 family. (219 aa)    
Predicted Functional Partners:
LOC101072026
Cytochrome b5 reductase 4.
   
 0.821
dnajc3
DnaJ (Hsp40) homolog, subfamily C, member 3a.
    
 
 0.682
suox
Sulfite oxidase.
   
  
 0.678
LOC101075777
Malate synthase-like.
  
 
 0.637
LOC101071384
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 0.599
oxnad1
Oxidoreductase NAD-binding domain containing 1.
   
 0.599
LOC101069670
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 0.599
LOC101073821
Uncharacterized protein.
  
    0.598
dnali1
Dynein, axonemal, light intermediate chain 1.
  
    0.597
H2U5I6_TAKRU
Uncharacterized protein.
  
    0.596
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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