STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101077748Cytochrome b5 domain containing 1; Belongs to the cytochrome b5 family. (219 aa)    
Predicted Functional Partners:
morn3
MORN repeat containing 3.
    
 
 0.893
rsph14
Uncharacterized protein.
   
 
 0.885
iqub
IQ motif and ubiquitin domain containing.
    
 
 0.862
tekt4
Tektin 4.
   
 
 0.856
LOC101074513
EF-hand domain (C-terminal) containing 1.
  
 
 0.850
cfap52
Cilia and flagella associated protein 52.
  
 
 0.804
H2SLX9_TAKRU
Enkurin domain-containing protein.
   
   0.803
LOC101072026
Cytochrome b5 reductase 4.
   
 0.801
cfap161
Cilia and flagella associated protein 161.
   
 
 0.798
IQCA1L
ATPase_AAA_core domain-containing protein.
    
 
 0.790
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.