Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101079112Laminin IV type A domain-containing protein. (1148 aa)    
Predicted Functional Partners:
lamb3
Uncharacterized protein.
   
 0.986
LOC101062763
Uncharacterized protein.
   
 0.912
LOC101074108
Laminin, beta 2 (laminin S).
   
 0.912
cd44
Link domain-containing protein.
    
 0.904
LOC101075118
Laminin, beta 2-like.
   
 0.888
LOC101075179
Laminin, beta 1b.
   
 0.886
itgb4
Integrin beta.
   
 0.831
LAMA2
Laminin subunit alpha 2.
   
 0.815
ENSTRUP00000074526
annotation not available
   
 0.815
Nmnat2
Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2.
      
 0.805
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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