Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101075512Uncharacterized protein. (703 aa)    
Predicted Functional Partners:
LOC101069736
Zgc:55558.
     
  0.929
hras
HRas proto-oncogene, GTPase a.
     
  0.929
LOC105418899
IL2RB_N1 domain-containing protein.
     
  0.900
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
 0.868
LOC101076633
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.868
LOC101073316
Tyrosine-protein kinase.
   
 0.822
LOC101068778
Tyrosine-protein kinase.
   
 0.822
jak1
Tyrosine-protein kinase.
   
 0.822
tyk2
Tyrosine-protein kinase.
   
 0.822
SHC3
SHC adaptor protein 3.
    
  0.806
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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