STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neu1Neuraminidase 1. (388 aa)    
Predicted Functional Partners:
LOC101065981
Sialidase 4.
  
  
 0.967
neu3
Sialidase 3 (membrane sialidase), tandem duplicate 1.
  
  
0.946
gla
Alpha-galactosidase.
     
 0.917
LOC101061415
Arylsulfatase A.
    
 0.915
galc
Galactosylceramidase b.
     
 0.902
LOC101078688
Uncharacterized protein.
     
  0.900
gal3st1
Galactose-3-O-sulfotransferase 1a.
     
  0.900
ugt8
UDP glycosyltransferase 8; Belongs to the UDP-glycosyltransferase family.
     
  0.900
ercc3
Excision repair cross-complementation group 3.
   
    0.867
glb1
Beta-galactosidase.
  
 0.832
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.