Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101070328Leukotriene B4 receptor 2a. (313 aa)    
Predicted Functional Partners:
adgrf1
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
      
 0.546
sdr39u1
Short chain dehydrogenase/reductase family 39U, member 1.
      
 0.459
oxgr1
Oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 2.
     
 0.459
ranbp10
RAN binding protein 10.
    
 
 0.459
ranbp9
RAN binding protein 9.
    
 
 0.459
diras1
DIRAS family, GTP-binding RAS-like 1b.
    
 0.459
rusc2
Uncharacterized protein.
      
 0.444
ENSTRUP00000057708
annotation not available
      
 0.444
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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