STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myogMyogenin. (250 aa)    
Predicted Functional Partners:
mef2d
Myocyte enhancer factor 2d.
    
 0.794
MEF2D
Myocyte enhancer factor 2D.
    
 0.794
mef2b
Myocyte enhancer factor 2b.
    
 0.741
mef2a
Myocyte enhancer factor 2aa.
    
 0.737
mymk
Myomaker, myoblast fusion factor.
   
  
 0.710
ccnb1
Cyclin B1; Belongs to the cyclin family.
   
  
 0.696
LOC101079401
Transcription factor 3a.
   
 0.687
tcf12
Transcription factor 12.
   
 0.687
TCF4
Transcription factor 4.
   
 0.687
tcf3
Transcription factor 3b.
   
 0.684
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.