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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nxnNucleoredoxin. (420 aa)    
Predicted Functional Partners:
LOC101075562
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.657
txn
Thioredoxin domain-containing protein.
    
 
 0.656
txnl4a
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
      
 0.566
LYPD6
LY6/PLAUR domain containing 6.
      
 0.541
ccdc92
Coiled-coil domain containing 92.
      
 0.497
cmtr1
Cap methyltransferase 1.
   
  
 0.461
ENSTRUP00000082556
annotation not available
      
 0.450
bcl2l13
BCL2 like 13.
      
 0.433
lrrtm2
Leucine rich repeat transmembrane neuronal 2.
      
 0.418
txnl4b
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
      
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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