STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101064566Cytochrome b5 domain containing 2; Belongs to the cytochrome b5 family. (239 aa)    
Predicted Functional Partners:
anapc16
Anaphase promoting complex subunit 16.
      
 0.566
LOC101069992
Cytochrome b5 type B; Belongs to the cytochrome b5 family.
   
  
 0.550
LOC101077599
Cytochrome b5 type A (microsomal); Belongs to the cytochrome b5 family.
   
  
 0.548
ATAD3A
ATPase family AAA domain containing 3A.
      
 0.544
LOC101069980
Proline rich 5a (renal).
      
 0.539
PRR5
Proline rich 5.
      
 0.539
LOC101065984
Tetraspanin.
      
 0.471
cd82
Tetraspanin.
      
 0.471
gm2a
ML domain-containing protein.
      
 0.450
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.