STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stmn4Stathmin; Belongs to the stathmin family. (206 aa)    
Predicted Functional Partners:
gng3
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 
 0.794
gnb2
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
   
 
 0.759
slc1a2
Solute carrier family 1 member 2b.
   
 
 0.715
LOC101062502
Aa_trans domain-containing protein.
   
 
 0.670
tox2
TOX high mobility group box family member 2.
    
 0.610
KIF5A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.604
ralgapa1
Ral GTPase activating protein, alpha subunit 1 (catalytic).
     
 0.564
ttl
Tubulin tyrosine ligase.
    
 
 0.563
LOC101076576
BRMS1 transcriptional repressor and anoikis regulator.
      
 0.562
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.546
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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