STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
runx3Runt-related transcription factor. (419 aa)    
Predicted Functional Partners:
cbfb
Core-binding factor subunit beta.
    
 0.933
mysm1
Histone H2A deubiquitinase MYSM1.
    
  0.916
gata3
GATA binding protein 3.
    
 0.754
yap1
Yes-associated protein 1.
    
 0.735
tgf-beta1
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 
 0.657
LOC101076688
Ets variant 2.
   
 0.652
ets1
V-ets avian erythroblastosis virus E26 oncogene homolog 1.
   
 0.652
ENSTRUP00000076289
annotation not available
   
 0.652
stub1
STIP1 homology and U-Box containing protein 1.
    
 0.642
supt3h
SPT3 homolog, SAGA and STAGA complex component.
      
 0.629
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.