STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpn23Protein tyrosine phosphatase, non-receptor type 23, a. (1891 aa)    
Predicted Functional Partners:
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 0.930
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.865
LOC101075600
Charged multivesicular body protein 4C.
   
 0.846
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.846
chmp4b
Charged multivesicular body protein 4Bb.
   
 0.846
LOC101072878
Uncharacterized protein.
   
 0.846
ENSTRUP00000018134
GRB2 related adaptor protein 2a.
   
 0.811
LOC101063794
GRB2 related adaptor protein 2a.
   
 0.811
hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
   
 0.788
grb2
Growth factor receptor-bound protein 2b.
   
 0.745
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.