STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crb2Crumbs cell polarity complex component 2b. (1419 aa)    
Predicted Functional Partners:
mpp5
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
    
 0.656
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
    
 0.656
LOC101078076
DENN/MADD domain containing 1A.
    
 
 0.627
rab35
RAB35, member RAS oncogene family b.
      
 0.564
rbpjl
Recombining binding protein suppressor of hairless-like protein isoform X1.
    
 0.462
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.462
rabif
RAB interacting factor.
      
 0.458
tgf-beta1
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.434
slf1
SMC5-SMC6 complex localization factor protein 1.
   
 0.414
Patj
InaD-like protein isoform X1.
    
 
 0.405
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.