Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ropn1lRhophilin associated tail protein 1-like. (244 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
   
 
 0.908
ENSTRUP00000038486
annotation not available
   
 
 0.739
ENSTRUP00000058125
Adenylate/nucleoside-diphosphate kinase.
   
 
 0.739
catip
Uncharacterized protein.
   
 
 0.662
nme5
NME/NM23 family member 5; Belongs to the NDK family.
   
 
 0.662
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.644
LOC101078712
Coiled-coil domain containing 114.
   
 
 0.644
tekt3
Tektin 3.
   
 
 0.631
dmrt1
DM domain-containing protein.
      
 0.624
ENSTRUP00000055829
Uncharacterized protein.
    
 
 0.612
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (40%) [HD]