LOC101064607 protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC101064607

Uncharacterized protein; Belongs to the peptidase S1 family. (442 aa)

Predicted Functional Partners:

f2

0.737

serpinc1

0.701

LOC101071528

0.655

mst1r

0.655

met

0.655

LOC101061223

0.608

f3

0.608

ENSTRUP00000078747

0.608

f8

0.601

LOC445945

0.601

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000078747	LOC101064607	ENSTRUP00000078747	ENSTRUP00000004159	Coagulation factor III (tissue factor).	Uncharacterized protein; Belongs to the peptidase S1 family.	0.608
ENSTRUP00000078747	f2	ENSTRUP00000078747	ENSTRUP00000014352	Coagulation factor III (tissue factor).	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.521
ENSTRUP00000078747	serpinc1	ENSTRUP00000078747	ENSTRUP00000026676	Coagulation factor III (tissue factor).	Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.	0.403
LOC101061223	LOC101064607	ENSTRUP00000018455	ENSTRUP00000004159	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.608
LOC101061223	f2	ENSTRUP00000018455	ENSTRUP00000014352	Uncharacterized protein.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.521
LOC101061223	serpinc1	ENSTRUP00000018455	ENSTRUP00000026676	Uncharacterized protein.	Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.	0.403
LOC101064607	ENSTRUP00000078747	ENSTRUP00000004159	ENSTRUP00000078747	Uncharacterized protein; Belongs to the peptidase S1 family.	Coagulation factor III (tissue factor).	0.608
LOC101064607	LOC101061223	ENSTRUP00000004159	ENSTRUP00000018455	Uncharacterized protein; Belongs to the peptidase S1 family.	Uncharacterized protein.	0.608
LOC101064607	LOC101071528	ENSTRUP00000004159	ENSTRUP00000025241	Uncharacterized protein; Belongs to the peptidase S1 family.	Macrophage stimulating 1 receptor a.	0.655
LOC101064607	LOC445945	ENSTRUP00000004159	ENSTRUP00000058198	Uncharacterized protein; Belongs to the peptidase S1 family.	Coagulation factor V; Belongs to the multicopper oxidase family.	0.601
LOC101064607	f2	ENSTRUP00000004159	ENSTRUP00000014352	Uncharacterized protein; Belongs to the peptidase S1 family.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.737
LOC101064607	f3	ENSTRUP00000004159	ENSTRUP00000063466	Uncharacterized protein; Belongs to the peptidase S1 family.	Coagulation factor IIIa.	0.608
LOC101064607	f8	ENSTRUP00000004159	ENSTRUP00000038358	Uncharacterized protein; Belongs to the peptidase S1 family.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.601
LOC101064607	met	ENSTRUP00000004159	ENSTRUP00000078415	Uncharacterized protein; Belongs to the peptidase S1 family.	Uncharacterized protein.	0.655
LOC101064607	mst1r	ENSTRUP00000004159	ENSTRUP00000035729	Uncharacterized protein; Belongs to the peptidase S1 family.	Macrophage stimulating 1 receptor b.	0.655
LOC101064607	serpinc1	ENSTRUP00000004159	ENSTRUP00000026676	Uncharacterized protein; Belongs to the peptidase S1 family.	Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.	0.701
LOC101071528	LOC101064607	ENSTRUP00000025241	ENSTRUP00000004159	Macrophage stimulating 1 receptor a.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.655
LOC101071528	f2	ENSTRUP00000025241	ENSTRUP00000014352	Macrophage stimulating 1 receptor a.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.659
LOC101071528	met	ENSTRUP00000025241	ENSTRUP00000078415	Macrophage stimulating 1 receptor a.	Uncharacterized protein.	0.677
LOC101071528	mst1r	ENSTRUP00000025241	ENSTRUP00000035729	Macrophage stimulating 1 receptor a.	Macrophage stimulating 1 receptor b.	0.683