STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kcnj13Potassium inwardly-rectifying channel, subfamily J, member 13. (363 aa)    
Predicted Functional Partners:
LOC105419563
Potassium voltage-gated channel delayed-rectifier subfamily S member 1.
   
  
 0.566
iqcb1
Uncharacterized protein.
      
 0.552
SLC12A6
Solute carrier family 12 member 6.
      
 0.521
LOC101067414
Solute carrier family 12 member 7a.
      
 0.521
LOC101080135
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.491
slc12a2
Solute carrier family 12 member 2.
   
  
 0.455
slc12a5
Solute carrier family 12 member 5a.
      
 0.450
igsf11
Immunoglobulin superfamily member 11.
      
 0.440
slc12a1
Solute carrier family 12 member 1.
   
  
 0.427
slc12a3
Solute carrier family 12 member 3.
   
  
 0.426
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.