Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
birc6Baculoviral IAP repeat containing 6. (4954 aa)    
Predicted Functional Partners:
casp9
Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.964
LOC101065324
Microtubule-associated protein 1 light chain 3 beta.
   
 0.961
rnf41
Ring finger protein 41.
    
 0.957
rps27a
Ribosomal protein S27a.
    
 0.951
GABARAPL2
GABA(A) receptor-associated protein like 2.
   
 0.936
LOC101062775
Microtubule-associated protein 1 light chain 3 gamma, like.
   
 0.933
LOC101076880
Zgc:92606.
   
 0.933
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
   
 0.933
LOC101071293
Ubiquitin-like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family.
  
 0.929
UBA6
Ubiquitin like modifier activating enzyme 6.
  
 0.929
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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