Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ttc27Tetratricopeptide repeat domain 27. (839 aa)    
Predicted Functional Partners:
eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.936
aar2
AAR2 splicing factor.
    
 
 0.889
eed
PWP2 small subunit processome component.
   
    0.887
wdr3
WD repeat domain 3.
   
  
 0.862
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
   
 
 0.849
suox
Sulfite oxidase.
    
   0.849
nat10
N-acetyltransferase 10.
   
    0.840
ncdn
Neurochondrin.
    
 
 0.835
eapp
E2f-associated phosphoprotein.
    
 
 0.808
ecd
Ecdysoneless homolog (Drosophila).
    
   0.800
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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