STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cluClusterin; Belongs to the clusterin family. (460 aa)    
Predicted Functional Partners:
dctn4
Dynactin 4.
      
 0.707
gucd1
Guanylyl cyclase domain containing 1.
      
 0.707
LOC101078177
Proto-oncogene c-Fos; Nuclear phosphoprotein which forms a tight but non-covalently linked complex with the JUN/AP-1 transcription factor. FOS has a critical function in regulating the development of cells destined to form and maintain the skeleton. It is thought to have an important role in signal transduction, cell proliferation and differentiation (By similarity).
      
 0.566
il13ra2
Uncharacterized protein.
      
 0.539
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.521
c6
Complement component 6.
   
 0.488
LOC101063946
Galectin.
   
  
 0.469
lgals2
Galectin.
   
  
 0.464
ENSTRUP00000043867
annotation not available
   
  
 0.455
LOC101070338
Retinol binding protein 3.
   
  
 0.455
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.