Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101071812Si:ch211-11n16.2. (654 aa)    
Predicted Functional Partners:
ZFYVE1
Zinc finger FYVE-type containing 1.
  
  
 
0.901
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
 0.850
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.827
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 0.827
rps27a
Ribosomal protein S27a.
    
 0.777
LOC101078992
UEV domain-containing protein.
   
 0.763
LOC101068384
Tumor susceptibility gene 101 protein-like.
    
 0.736
LOC101079670
Tumor susceptibility 101a.
    
 0.736
ptpn23
Protein tyrosine phosphatase, non-receptor type 23, a.
   
 0.703
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.698
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (50%) [HD]