Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101076432AMMECR1 domain-containing protein. (334 aa)    
Predicted Functional Partners:
pggt1b
Protein geranylgeranyltransferase type I, beta subunit.
    
   0.865
fnta
Farnesyltransferase, CAAX box, alpha.
    
   0.731
tsen54
TSEN54 tRNA splicing endonuclease subunit.
    
   0.621
memo1
Mediator of cell motility 1.
  
    0.592
fam199x
Family with sequence similarity 199, X-linked.
   
  
 0.578
tmem164
Transmembrane protein 164.
   
  
 0.578
pudp
Pseudouridine 5'-phosphatase.
   
  
 0.574
edc3
Enhancer of mRNA decapping 3 homolog (S. cerevisiae).
   
  
 0.561
LOC101068635
ALG13 UDP-N-acetylglucosaminyltransferase subunit.
   
  
 0.557
naxe
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
   
  
 0.555
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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