STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hecw1Si:ch211-188f17.1. (1656 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
 0.780
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.750
dvl1
Dishevelled segment polarity protein 1a.
    
 0.659
LOC105417201
Proteasome 26S subunit, non-ATPase 4a.
    
 0.640
LOC101067241
Proteasome 26S subunit, non-ATPase 4b.
    
 0.640
LOC101074730
Transmembrane phosphatase with tensin homology.
    
 0.615
pten
Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.
    
 0.615
smad7
Mothers against decapentaplegic homolog.
    
 0.606
LOC101078620
Mothers against decapentaplegic homolog.
    
 0.606
smad6
Mothers against decapentaplegic homolog.
    
 0.606
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (30%) [HD]