Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000006180annotation not available (452 aa)    
Predicted Functional Partners:
LOC101070646
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.845
LOC101061450
Myosin, light chain 13.
   
 0.813
LOC101063574
Myosin light chain 4.
   
 0.757
tnni1
Troponin I type 1a (skeletal, slow).
   
 0.708
LOC101078789
Uncharacterized protein.
   
 0.680
LOC101062528
Myosin, light chain 6, alkali, smooth muscle and non-muscle.
   
 0.680
LOC101064268
Uncharacterized protein.
   
 0.636
LOC101071916
Myosin, light chain 2a, regulatory, cardiac, slow.
   
 0.636
LOC101079067
Uncharacterized protein.
   
 0.610
LOC101069867
Uncharacterized protein.
   
 0.610
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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