Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101075791Fibronectin type-III domain-containing protein. (372 aa)    
Predicted Functional Partners:
pde9a
Phosphodiesterase 9A.
    
 
 0.708
LOC101077492
Phosphodiesterase 9A like; Belongs to the cyclic nucleotide phosphodiesterase family.
    
 
 0.708
tma16
Translation machinery associated 16 homolog.
      
 0.580
LIMD1
LIM domains containing 1.
    
   0.569
wtip
WT1 interacting protein.
    
   0.569
LOC101074688
Phosphodiesterase.
    
 
 0.566
LOC101078312
PDEase domain-containing protein; Belongs to the cyclic nucleotide phosphodiesterase family.
    
 
 0.566
kif15
Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
   0.555
ENSTRUP00000051618
CD99 molecule-like 2.
      
 0.492
paqr5
Progestin and adipoQ receptor family member Va.
    
 
 0.481
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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