STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pus10Pseudouridine synthase 10. (537 aa)    
Predicted Functional Partners:
abitram
Actin binding transcription modulator.
    
   0.760
H2SGL9_TAKRU
NOP10 ribonucleoprotein homolog (yeast).
     
 0.677
pus7
Pseudouridine synthase 7.
   
  
 0.673
rpusd1
RNA pseudouridine synthase domain containing 1.
      
 0.625
pus7l
Pseudouridine synthase 7 like.
   
  
 0.598
pus1
Pseudouridine synthase 1.
   
  
 0.595
LOC101073954
Dyskeratosis congenita 1, dyskerin.
   
  
 0.587
pus3
Pseudouridylate synthase 3.
   
  
 0.583
LOC101075019
tRNA-yW synthesizing protein 1 homolog (S. cerevisiae).
      
 0.576
trub2
TruB pseudouridine (psi) synthase family member 2.
   
  
 0.566
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.