Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101075298Uncharacterized protein. (319 aa)    
Predicted Functional Partners:
hsbp1
Heat shock factor binding protein 1a.
    
 0.548
LOC101070860
TSC complex subunit 1b.
    
 0.492
H2UCW4_TAKRU
TSC complex subunit 1.
    
 0.492
LOC101076976
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
 0.492
LOC101069079
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
    
 0.492
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
    
 0.430
DNAJA2
DnaJ heat shock protein family (Hsp40) member A2.
   
 0.410
DNAJA4
DnaJ heat shock protein family (Hsp40) member A4.
   
 0.410
LOC101073900
DnaJ heat shock protein family (Hsp40) member A2b.
   
 0.410
LOC101065819
Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.
    
 0.408
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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