STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tctn1DUF1619 domain-containing protein. (430 aa)    
Predicted Functional Partners:
EEF2
Eukaryotic translation elongation factor 2.
    
 0.752
ENSTRUP00000057217
C2 domain-containing protein.
    
 0.671
kin
Kin17 DNA and RNA binding protein.
    
 0.648
tmem67
Transmembrane protein 67.
   
 
 0.619
LOC105417852
Uncharacterized protein.
    
 0.592
B9d2
B9 domain containing 2.
    
 0.592
mks1
MKS transition zone complex subunit 1.
    
 0.589
ahi1
Abelson helper integration site 1.
    
 0.546
ENSTRUP00000078928
annotation not available
    
 0.546
TMEM216
Transmembrane protein 216.
     
 0.541
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.