STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101075146Ras association domain family member 6. (344 aa)    
Predicted Functional Partners:
LOC101061984
Protein kinase domain-containing protein.
    
 0.605
stk3
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.605
H2RRN3_TAKRU
APC membrane recruitment protein 2.
    
 
 0.558
sav1
Salvador family WW domain containing protein 1.
    
 
 0.477
nprl2
NPR2 like, GATOR1 complex subunit.
      
 0.461
LOC101077935
Ras association domain family member 8a.
   
  
 0.449
rassf7
Ras association domain family member 7a.
   
  
 0.449
RASSF10
Ras association domain family member 10.
   
  
 0.436
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
      
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.