Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
crebl2cAMP responsive element binding protein-like 2. (122 aa)    
Predicted Functional Partners:
crebrf
CREB3 regulatory factor isoform X1.
   
 
 0.870
thoc7
THO complex 7.
    
   0.763
borcs8
BLOC-1 related complex subunit 8.
    
 
 0.716
borcs6
Si:dkey-72l14.4.
   
 
 0.708
snapin
SNAP associated protein.
   
 
 0.704
etv6
Uncharacterized protein.
      
 0.702
gpr19
G protein-coupled receptor 19.
      
 0.696
kxd1
KxDL motif containing 1.
   
 
 0.653
bloc1s1
Biogenesis of lysosomal organelles complex-1, subunit 1.
    
 
 0.637
slc41a2
Solute carrier 41.
      
 0.583
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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