STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc102aCoiled-coil domain containing 102A. (613 aa)    
Predicted Functional Partners:
ktn1
Kinectin 1.
      
 0.744
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
      
 0.618
heg1
Heart development protein with EGF-like domains 1.
      
 0.569
srgap1
SLIT-ROBO Rho GTPase activating protein 1a.
      
 0.537
sugct
succinyl-CoA:glutarate-CoA transferase.
      
 0.497
fut8
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
      
 0.494
LOC101068913
Growth differentiation factor 6a.
      
 0.453
dok6
Docking protein 6.
 
    
 0.428
col4a1
Collagen, type IV, alpha 1.
      
 0.426
LOC101073130
CDC42 effector protein (Rho GTPase binding) 4a.
      
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.