Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nabp1Nucleic acid binding protein 1a. (219 aa)    
Predicted Functional Partners:
ints3
Si:dkey-27c15.3.
    
 0.973
ints1
Integrator complex subunit 1.
    
 0.970
ints5
Integrator complex subunit 5.
    
 0.959
ints10
Integrator complex subunit 10.
    
 0.957
ints11
Integrator complex subunit 11.
   
 0.956
ints7
Integrator complex subunit 7.
    
 0.948
ints8
Integrator complex subunit 8.
    
 0.941
ints4
Integrator complex subunit 4.
    
 0.934
LOC101077641
Ints3 and nabp interacting protein.
    
 0.926
INIP
INTS3 and NABP interacting protein.
    
 0.926
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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