Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
atp5mfATP synthase membrane subunit f. (89 aa)    
Predicted Functional Partners:
atp5pd
ATP synthase peripheral stalk subunit d.
   
 0.995
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
 0.993
atp5pf
ATP synthase peripheral stalk subunit F6.
   
 0.992
atp5po
ATP synthase peripheral stalk subunit OSCP.
   
 0.988
atp5f1d
ATP synthase F1 subunit delta.
   
 0.986
atp5f1e
ATP synthase F1 subunit epsilon.
   
 0.982
LOC101072733
Uncharacterized protein.
   
 0.976
Atp5me
Uncharacterized protein.
   
 0.976
ENSTRUP00000055493
ATP synthase membrane subunit ea.
   
 0.976
atp5mg
ATP synthase subunit; Mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F1 - containing the extramembraneous catalytic core, and F0 - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proto [...]
   
 0.976
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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