STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTRUP00000008077Calmodulin 1b. (175 aa)    
Predicted Functional Partners:
LOC101071995
Calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2; Belongs to the protein kinase superfamily.
   
 0.743
camk2a
CaMKII_AD domain-containing protein.
   
 0.743
LOC101068297
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2.
   
 0.743
camk2d
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.743
H2UVZ3_TAKRU
Protein kinase domain-containing protein.
   
 0.743
LOC101072908
Peptidylprolyl isomerase.
   
 0.723
fkbp1b
Peptidylprolyl isomerase.
   
 0.723
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.709
LOC101069407
Peptidylprolyl isomerase.
   
 0.708
Eef2k
Eukaryotic elongation factor 2 kinase isoform X1.
    
 
 0.706
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.