Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ighmbp2Immunoglobulin mu DNA binding protein 2. (980 aa)    
Predicted Functional Partners:
ENSTRUP00000082865
Negative elongation factor complex member E.
    
 
 0.931
nelfa
Negative elongation factor complex member A.
   
   0.893
grsf1
G-rich RNA sequence binding factor 1.
    
   0.794
LOC101078643
Uncharacterized protein.
      
 0.750
abt1
Activator of basal transcription 1.
    
 
 0.732
mapk15
Mitogen-activated protein kinase.
      
 0.718
LOC101069329
KAT8 regulatory NSL complex subunit 3.
      
 0.717
timm13
Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.
      
 0.713
rpgrip1l
RPGRIP1 like.
      
 0.707
zc4h2
Zinc finger, C4H2 domain containing.
      
 0.639
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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