Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
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Co-expression
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[Homology]
Score
H2S785_TAKRUSorting nexin 20. (321 aa)    
Predicted Functional Partners:
c9h19orf12
Chromosome 19 open reading frame 12.
    
   0.767
H2TV94_TAKRU
Uncharacterized protein.
      
 0.727
arl2bp
ADP-ribosylation factor-like 2 binding protein.
      
 0.727
gpatch3
G patch domain containing 3.
      
 0.723
plekha8
Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8.
      
 0.723
rspry1
Ring finger and SPRY domain containing 1.
      
 0.722
LOC101077330
Uncharacterized protein.
   
 
 0.696
heca
Hdc homolog, cell cycle regulator.
      
 0.694
efcab1
Uncharacterized protein.
     
 0.688
znrf2
Zinc and ring finger 2b.
      
 0.676
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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