STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
trappc8Trafficking protein particle complex 8. (1433 aa)    
Predicted Functional Partners:
trappc12
Trafficking protein particle complex 12.
   
 0.999
trappc2l
Trafficking protein particle complex 2-like.
    
 0.998
trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.998
trappc5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.997
trappc11
Trafficking protein particle complex 11.
   
 0.996
trappc3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.996
trappc2
Trafficking protein particle complex 2.
    
 0.996
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.995
trappc10
Trafficking protein particle complex 10.
   
 0.994
TRAPPC9
Trafficking protein particle complex 9.
   
 0.992
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.