Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rpl35aRibosomal protein L35a. (110 aa)    
Predicted Functional Partners:
rpl27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.999
rpl31
Ribosomal protein L31.
   
 0.999
Rps26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.999
rpl14
Ribosomal_L14e domain-containing protein.
   
 0.999
rpl6
Ribosomal protein L6.
   
 0.999
H2VA08_TAKRU
Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
rpl17
Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 0.999
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 0.999
rps19
Ribosomal protein S19.
   
 
 0.999
RPS17
Ribosomal protein S17.
   
 
 0.999
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.