Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
smarcc2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1044 aa)    
Predicted Functional Partners:
LOC101073803
ARID domain-containing protein.
   
 0.945
smarcc1
Uncharacterized protein.
  
  
 
0.941
LOC101079524
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.
  
  
 
0.941
smarcd1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
   
 0.941
SMARCE1
HMG box domain-containing protein.
   
 0.939
LOC101066868
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
   
 0.939
LOC101080222
Polybromo 1.
  
 0.938
brd7
Bromodomain containing 7.
   
 0.937
brd9
Bromodomain containing 9.
   
 0.926
LOC101068543
Polybromo 1, like.
   
 0.925
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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