STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101069975Nescient helix loop helix 2. (123 aa)    
Predicted Functional Partners:
LOC101072332
Transcription factor 12-like.
   
 0.553
LOC101079401
Transcription factor 3a.
   
 0.553
tcf3
Transcription factor 3b.
   
 0.553
tcf12
Transcription factor 12.
   
 0.553
TCF4
Transcription factor 4.
   
 0.553
pcsk1
Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family.
      
 0.512
ptgfrn
Uncharacterized protein.
      
 0.507
gdap2
Ganglioside induced differentiation associated protein 2.
      
 0.502
LOC101063123
Scratch family zinc finger 2.
   
 
 0.480
LOC101062944
Homeobox domain-containing protein.
    
 0.465
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.