Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101075029 | bdp1 | ENSTRUP00000008611 | ENSTRUP00000054422 | TATA-box binding protein like 1. | SANT domain-containing protein. | 0.897 |
LOC101075029 | gtf2b | ENSTRUP00000008611 | ENSTRUP00000055433 | TATA-box binding protein like 1. | General transcription factor IIB. | 0.910 |
LOC101075029 | gtf2e1 | ENSTRUP00000008611 | ENSTRUP00000019189 | TATA-box binding protein like 1. | General transcription factor IIE, polypeptide 1, alpha. | 0.886 |
LOC101075029 | taf1 | ENSTRUP00000008611 | ENSTRUP00000039888 | TATA-box binding protein like 1. | Transcription initiation factor TFIID subunit. | 0.899 |
LOC101075029 | taf10 | ENSTRUP00000008611 | ENSTRUP00000039300 | TATA-box binding protein like 1. | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | 0.899 |
LOC101075029 | taf11 | ENSTRUP00000008611 | ENSTRUP00000050701 | TATA-box binding protein like 1. | TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.897 |
LOC101075029 | taf13 | ENSTRUP00000008611 | ENSTRUP00000071053 | TATA-box binding protein like 1. | Transcription initiation factor TFIID subunit 13. | 0.896 |
LOC101075029 | taf2 | ENSTRUP00000008611 | ENSTRUP00000059494 | TATA-box binding protein like 1. | TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.899 |
LOC101075029 | taf7l | ENSTRUP00000008611 | ENSTRUP00000007157 | TATA-box binding protein like 1. | TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.898 |
LOC101075029 | taf9 | ENSTRUP00000008611 | ENSTRUP00000002470 | TATA-box binding protein like 1. | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.898 |
bdp1 | LOC101075029 | ENSTRUP00000054422 | ENSTRUP00000008611 | SANT domain-containing protein. | TATA-box binding protein like 1. | 0.897 |
bdp1 | gtf2b | ENSTRUP00000054422 | ENSTRUP00000055433 | SANT domain-containing protein. | General transcription factor IIB. | 0.563 |
gtf2b | LOC101075029 | ENSTRUP00000055433 | ENSTRUP00000008611 | General transcription factor IIB. | TATA-box binding protein like 1. | 0.910 |
gtf2b | bdp1 | ENSTRUP00000055433 | ENSTRUP00000054422 | General transcription factor IIB. | SANT domain-containing protein. | 0.563 |
gtf2b | gtf2e1 | ENSTRUP00000055433 | ENSTRUP00000019189 | General transcription factor IIB. | General transcription factor IIE, polypeptide 1, alpha. | 0.989 |
gtf2b | taf1 | ENSTRUP00000055433 | ENSTRUP00000039888 | General transcription factor IIB. | Transcription initiation factor TFIID subunit. | 0.980 |
gtf2b | taf10 | ENSTRUP00000055433 | ENSTRUP00000039300 | General transcription factor IIB. | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | 0.969 |
gtf2b | taf11 | ENSTRUP00000055433 | ENSTRUP00000050701 | General transcription factor IIB. | TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.976 |
gtf2b | taf13 | ENSTRUP00000055433 | ENSTRUP00000071053 | General transcription factor IIB. | Transcription initiation factor TFIID subunit 13. | 0.920 |
gtf2b | taf2 | ENSTRUP00000055433 | ENSTRUP00000059494 | General transcription factor IIB. | TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. | 0.941 |
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