STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
shld2Si:ch211-134m17.9. (859 aa)    
Predicted Functional Partners:
mad2l2
Mitotic arrest deficient 2 like 2.
    
 
 0.957
ENSTRUP00000081235
annotation not available
    
 
 0.914
LOC101071482
CTS telomere maintenance complex component 1.
  
   
 0.616
rif1
Replication timing regulatory factor 1.
    
 
 0.546
rev3l
REV3 like, DNA directed polymerase zeta catalytic subunit.
      
 0.497
kiz
Uncharacterized protein.
      
 0.440
COPS6
COP9 signalosome subunit 6.
      
 0.434
LOC105417034
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
     0.432
mmrn2
Uncharacterized protein.
  
     0.406
rfwd3
Ring finger and WD repeat domain 3.
      
 0.404
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.