apmap protein (Takifugu rubripes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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experimentally determined

co-expression

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[Homology]

Score

apmap

Adipocyte plasma membrane associated protein. (415 aa)

Predicted Functional Partners:

fdxacb1

0.823

tsfm

0.804

mrpl20

0.775

rpl23a

0.737

exosc10

0.730

pdcd11

0.727

rps9

0.722

imp3

0.722

cdh22

0.702

mrpl17

0.700

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
apmap	cdh22	ENSTRUP00000009151	ENSTRUP00000061983	Adipocyte plasma membrane associated protein.	Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins.	0.702
apmap	exosc10	ENSTRUP00000009151	ENSTRUP00000031620	Adipocyte plasma membrane associated protein.	Exosome component 10.	0.730
apmap	fdxacb1	ENSTRUP00000009151	ENSTRUP00000043896	Adipocyte plasma membrane associated protein.	Ferredoxin-fold anticodon binding domain containing 1.	0.823
apmap	imp3	ENSTRUP00000009151	ENSTRUP00000065466	Adipocyte plasma membrane associated protein.	IMP U3 small nucleolar ribonucleoprotein 3.	0.722
apmap	mrpl17	ENSTRUP00000009151	ENSTRUP00000059125	Adipocyte plasma membrane associated protein.	Mitochondrial ribosomal protein L17.	0.700
apmap	mrpl20	ENSTRUP00000009151	ENSTRUP00000079172	Adipocyte plasma membrane associated protein.	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	0.775
apmap	pdcd11	ENSTRUP00000009151	ENSTRUP00000036548	Adipocyte plasma membrane associated protein.	Programmed cell death 11.	0.727
apmap	rpl23a	ENSTRUP00000009151	ENSTRUP00000068150	Adipocyte plasma membrane associated protein.	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.737
apmap	rps9	ENSTRUP00000009151	ENSTRUP00000040636	Adipocyte plasma membrane associated protein.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.722
apmap	tsfm	ENSTRUP00000009151	ENSTRUP00000007195	Adipocyte plasma membrane associated protein.	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	0.804
cdh22	apmap	ENSTRUP00000061983	ENSTRUP00000009151	Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins.	Adipocyte plasma membrane associated protein.	0.702
exosc10	apmap	ENSTRUP00000031620	ENSTRUP00000009151	Exosome component 10.	Adipocyte plasma membrane associated protein.	0.730
exosc10	imp3	ENSTRUP00000031620	ENSTRUP00000065466	Exosome component 10.	IMP U3 small nucleolar ribonucleoprotein 3.	0.917
exosc10	pdcd11	ENSTRUP00000031620	ENSTRUP00000036548	Exosome component 10.	Programmed cell death 11.	0.932
exosc10	rpl23a	ENSTRUP00000031620	ENSTRUP00000068150	Exosome component 10.	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.754
exosc10	rps9	ENSTRUP00000031620	ENSTRUP00000040636	Exosome component 10.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.900
fdxacb1	apmap	ENSTRUP00000043896	ENSTRUP00000009151	Ferredoxin-fold anticodon binding domain containing 1.	Adipocyte plasma membrane associated protein.	0.823
fdxacb1	imp3	ENSTRUP00000043896	ENSTRUP00000065466	Ferredoxin-fold anticodon binding domain containing 1.	IMP U3 small nucleolar ribonucleoprotein 3.	0.599
fdxacb1	mrpl20	ENSTRUP00000043896	ENSTRUP00000079172	Ferredoxin-fold anticodon binding domain containing 1.	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	0.446
fdxacb1	pdcd11	ENSTRUP00000043896	ENSTRUP00000036548	Ferredoxin-fold anticodon binding domain containing 1.	Programmed cell death 11.	0.595