Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lypla2Lysophospholipase 2. (236 aa)    
Predicted Functional Partners:
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
   
 0.946
LOC105418815
Uncharacterized protein.
     
 0.915
LOC101076141
Patatin-like phospholipase domain containing 6.
  
 
 0.911
chaf1b
Chromatin assembly factor 1, subunit B.
    
 
 0.711
ENSTRUP00000080947
Cardiolipin synthase 1.
  
  
 0.658
atad2b
ATPase family AAA domain containing 2B.
    
 
 0.638
Gap43
Neuromodulin_N domain-containing protein.
    
 0.613
ptprk
Protein tyrosine phosphatase receptor type K.
      
 0.612
ghsr
Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family.
      
 0.610
LOC101068259
Anti-silencing function 1Ba histone chaperone.
    
 
 0.554
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.