Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
aipPeptidylprolyl isomerase. (339 aa)    
Predicted Functional Partners:
nub1
Negative regulator of ubiquitin-like proteins 1.
    
 
 0.796
ahr1b
Aryl hydrocarbon receptor 1B.
    
 0.793
ahr2a
Uncharacterized protein.
    
 0.786
ahr2b
PAS domain-containing protein.
    
 0.785
LOC101076976
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
 0.745
LOC101069079
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
    
 0.745
ahr1a
Uncharacterized protein.
    
 0.705
ptges3
Prostaglandin E synthase 3b (cytosolic).
    
 0.655
LOC101068061
Prostaglandin E synthase 3a (cytosolic).
    
 0.655
cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
   0.616
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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