Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cdylChromodomain protein, Y-like. (555 aa)    
Predicted Functional Partners:
scp2
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.915
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.875
ech1
Enoyl CoA hydratase 1, peroxisomal.
  
0.871
ehmt1
Euchromatic histone-lysine N-methyltransferase 1b.
   
 0.781
ehmt2
Uncharacterized protein.
   
 0.781
LOC101070634
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
 0.764
SUV39H1
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
 0.764
LOC101063240
SET domain and mariner transposase fusion gene.
   
 0.764
ENSTRUP00000057723
annotation not available
   
 0.764
ENSTRUP00000058767
annotation not available
   
 0.764
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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