Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam214bFamily with sequence similarity 214 member B. (689 aa)    
Predicted Functional Partners:
cenpt
Uncharacterized protein.
      
 0.737
rhno1
Si:ch73-352p4.5.
      
 0.654
kif20b
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
   0.624
kif20a
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
   0.624
LOC101070020
Zinc finger CCCH-type containing 11A.
   
  
 0.609
taf13
Transcription initiation factor TFIID subunit 13.
      
 0.588
thoc7
THO complex 7.
      
 0.585
dnaja3
DnaJ heat shock protein family (Hsp40) member A3a.
   
   0.579
LOC101063317
Uncharacterized protein.
   
   0.579
thoc3
THO complex 3.
      
 0.571
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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